BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029B03SP1|AL429010
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1757 1708 0.0
>3x_Contig1757
Length = 24754
Score = 1708 bits (861), Expect = 0.0
Identities = 862/863 (99%)
Strand = Plus / Minus
Query: 1 gatcatgatccactcaattgcactgttctctaagtwaattagttcaaacaaggttcgaag 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9100 gatcatgatccactcaattgcactgttctctaagtaaattagttcaaacaaggttcgaag 9041
Query: 61 agatttgctggtttgaatttctcatcaaaccaccagatttacaaccaccaccagatcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9040 agatttgctggtttgaatttctcatcaaaccaccagatttacaaccaccaccagatcgat 8981
Query: 121 agtaaagccggttttttcgcccaagtgcctgtaaatagaaaaaggcctaggtcaaccgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8980 agtaaagccggttttttcgcccaagtgcctgtaaatagaaaaaggcctaggtcaaccgtt 8921
Query: 181 ccgattcttactcttcttcgcagagtcacacgcacaaaaggggtctacattttggtcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8920 ccgattcttactcttcttcgcagagtcacacgcacaaaaggggtctacattttggtcctg 8861
Query: 241 ctcctaacactcttctttcgactgtttctttcatccagagaaactttcaatttggaagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8860 ctcctaacactcttctttcgactgtttctttcatccagagaaactttcaatttggaagac 8801
Query: 301 tttgcagtgaactttcatataaatgaatcataagaattcattatttcaaattgtttccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8800 tttgcagtgaactttcatataaatgaatcataagaattcattatttcaaattgtttccta 8741
Query: 361 acgaaaagagtttacaaaggttttagtagtggtccgtagtagtgtttctacagactacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8740 acgaaaagagtttacaaaggttttagtagtggtccgtagtagtgtttctacagactacag 8681
Query: 421 ttcattggatacagactgtattcggcaattgcagagtaggagacagaagattaggtgatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8680 ttcattggatacagactgtattcggcaattgcagagtaggagacagaagattaggtgatt 8621
Query: 481 agaagtgatttcatttgttttttttttgtttaacgattagcaagagatatggtgatactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8620 agaagtgatttcatttgttttttttttgtttaacgattagcaagagatatggtgatactt 8561
Query: 541 ctcagaggaaggttaaatgttcctagcatttggtcactggcccgtcagcagcatgtttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8560 ctcagaggaaggttaaatgttcctagcatttggtcactggcccgtcagcagcatgtttca 8501
Query: 601 ggtttgtttcagtgcgctaggttttattctgaggtaagacttcgagattcttcgaagttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8500 ggtttgtttcagtgcgctaggttttattctgaggtaagacttcgagattcttcgaagttt 8441
Query: 661 gttgctttgaaagatgtaaacgatctacgggcaaccagcttgccagatttcatatcttcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8440 gttgctttgaaagatgtaaacgatctacgggcaaccagcttgccagatttcatatcttcc 8381
Query: 721 ccaaattcgaaactacaatcgttgatatggcaccgtcctatgcaaaacgtgtttttaatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8380 ccaaattcgaaactacaatcgttgatatggcaccgtcctatgcaaaacgtgtttttaatg 8321
Query: 781 aagaaaccttggactgataccactagggaggccatggttgagttcatcacacacttgcac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8320 aagaaaccttggactgataccactagggaggccatggttgagttcatcacacacttgcac 8261
Query: 841 gattcttacccagaagtcaacgt 863
|||||||||||||||||||||||
Sbjct: 8260 gattcttacccagaagtcaacgt 8238
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7750
Number of Sequences: 1807
Number of extensions: 7750
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 1
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)